Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs5757250 chr22:39098860 C/T 2.36E-5 252 32.6 22.7 19.02 KM Plot
SARC rs5757261 chr22:39116082 C/T 3.44E-5 255 33.17 24.13 19.02 KM Plot
SARC rs57851864 chr11:64645037 C/T 9.06E-5 253 33.95 24.6 7.82 KM Plot
SARC rs58247918 chr2:70238435 T/C 4.75E-8 254 32.78 31.93 10.72 KM Plot
SARC rs58299386 chr8:129451995 C/G 1.83E-13 257 33.9 26.53 3.97 KM Plot
SARC rs583804 chr13:30140104 G/T 7.06E-12 258 31.97 35.37 3.87 KM Plot
SARC rs58515094 chr3:52995575 C/T 2.18E-14 254 30.93 34.57 1.17 KM Plot
SARC rs58645732 chr3:42699475 C/T 1.77E-5 251 32.13 34.97 13.08 KM Plot
SARC rs58660500 chr3:53086573 C/T 0 257 32.3 32.87 2.13 KM Plot
SARC rs589556 chr11:64646842 A/G 9.11E-5 252 7.82 25.15 33.95 KM Plot
SARC rs590026 chr1:182452683 A/G 1.54E-7 258 31.1 34.88 6.72 KM Plot
SARC rs59392121 chr5:262825 T/G 4.63E-6 256 33.83 30.93 9.47 KM Plot
SARC rs59697910 chr5:177871391 C/A 4.68E-5 257 29.87 41.57 10.87 KM Plot
SARC rs59801029 chr18:76986308 C/T 6.94E-5 255 31.57 36.83 12.8 KM Plot
SARC rs59889656 chr3:39168309 T/A 7.64E-5 254 29.87 36.27 12.17 KM Plot